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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs6579928 chr5:151674174 T/C FILIP1L chr3:99548985-99833357:- -0.22 -6.13 1.83E-9 Box Plot
THCA rs6579929 chr5:151681573 C/A FILIP1L chr3:99548985-99833357:- -0.22 -6.07 2.66E-9 Box Plot
THCA rs658385 chr8:9892177 C/T SGK223 chr8:8175258-8244008:- 0.38 7.46 4.02E-13 Box Plot
THCA rs658398 chr11:77595717 C/T INTS4L1 chr7:64601603-64694600:+ 0.44 8.01 8.97E-15 Box Plot
THCA rs6586060 chr10:88914588 G/A FAM35B chr10:46897641-46939143:+ 0.38 7.38 6.97E-13 Box Plot
THCA rs6586062 chr10:88940771 G/A FAM35B chr10:46897641-46939143:+ 0.27 5.93 5.68E-9 Box Plot
THCA rs6586063 chr10:88949045 A/G FAM35B chr10:46897641-46939143:+ 0.62 10.04 1.19E-21 Box Plot
THCA rs6586064 chr10:88954020 C/A FAM35B chr10:46897641-46939143:+ 0.62 9.96 2.39E-21 Box Plot
THCA rs6587559 chr1:151217738 C/T PIPSL chr10:95717948-95721297:- 0.35 6.26 8.4E-10 Box Plot
THCA rs6587562 chr1:151246241 C/G PIPSL chr10:95717948-95721297:- -0.35 -6.18 1.36E-9 Box Plot
THCA rs6591585 chr11:60201814 T/C PRDM6 chr5:122424816-122529960:+ -0.58 -5.87 8.01E-9 Box Plot
THCA rs6592728 chr11:77247260 A/G INTS4L1 chr7:64601603-64694600:+ 0.36 6.15 1.68E-9 Box Plot
THCA rs6592730 chr11:77274203 T/C INTS4L1 chr7:64601603-64694600:+ 0.35 6.07 2.64E-9 Box Plot
THCA rs6592737 chr11:77322619 A/T INTS4L1 chr7:64601603-64694600:+ 0.36 6.16 1.58E-9 Box Plot
THCA rs6592738 chr11:77323126 C/T INTS4L1 chr7:64601603-64694600:+ 0.5 8.08 5.51E-15 Box Plot